SARS-CoV-2 viral sequencing data (COG-UK data) - Lineage/Variant Data - Scotland
Summary
Abstract
Summary of SARS-CoV-2 lineages and mutations
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Contact point
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Digital object identifier (DOI)Not available
Keywords
Publisher
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Identifier7
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NamePublic Health Scotland
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Logo
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DescriptionPublic Health Scotland is an NHS Board. We are uniquely sponsored by the Scottish Government and the Convention of Scottish Local Authorities (COSLA) on behalf of local government.
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Contact point
Documentation
Description
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Associated media
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Available resource files can be downloaded below.
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Is part of
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Coverage
Spatial
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Spatial coverage
United Kingdom, Scotland
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Geographic levelsNot available
Temporal
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Start date28/02/2021
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End dateNot available
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FrequencyWeekly
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Distribution release date19/08/2021
Provenance
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PurposeOther
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SourceLims
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Collection situationNot available
Access and governance
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Conditions of accessGenetic studies only
Requesting access to this data
This is a secure dataset that can only be accessed by researchers from approved organisations.
Find out how to apply to access this dataset
Usage
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Conditions of useProject-specific restrictions
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Resource creatorCOG-UK
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Is referenced byNot available
Access
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Access rights
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Access serviceScottish National Safe Haven / Trusted Research Environment https://publichealthscotland.scot/services/data-research-and-innovation-services/electronic-data-research-and-innovation-service-edris/national-safe-haven-nsh/
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JurisdictionScotland
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Data controllerPublic Health Scotland
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Data processorPublic Health Scotland
Format and standards
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LanguageEnglish
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Formatcsv
Enrichment and linkage
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Related datasets
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Linkage opportunityNot available
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Tools
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Synthetic data
Synthetic data is not yet available for this dataset.
Data dictionary
PSEUDO-ANONYMISED ID NUMBER
PSEUDO-ANONYMISED ID NUMBER
SEQUENCE_NAME
sequence_name
SHORTID
shortid
COUNTRY
country
ADM1
adm1
IS_PILLAR_2
is_pillar_2
SAMPLE_DATE
sample_date
EPI_WEEK
epi_week
LINEAGE
lineage
LINEAGE_SUPPORT
lineage_support
| Variable name | Variable description | Data type | |
|---|---|---|---|
| PSEUDO-ANONYMISED ID NUMBER | PSEUDO-ANONYMISED ID NUMBER | ||
| sequence_name | sequence_name | ||
| shortid | shortid | ||
| country | country | ||
| adm1 | adm1 | ||
| is_pillar_2 | is_pillar_2 | ||
| sample_date | sample_date | ||
| epi_week | epi_week | ||
| lineage | lineage | ||
| lineage_support | lineage_support |